Strain & Genotype Data Description


SS-YBN/Mcwi

Genetic characteristics of the SS-YBN/Mcwi consomic strains studied.
Presented are the data from a total genome scan performed at a 20 cM interval. Chromosomes are shown in the first column. Genetic markers used are shown in the first column. The last 3 columns display control DNA from BN, SS, and het rats. Other columns display the
results for DNA from individual progenitors of the animals used by the Phenotyping Core and sent to CRL.
Table Legend:
BN: parental control DNA
SS: parental control DNA
HET: F1 Heterozygous DNA (from female)
1: Genotyping score given to BN homozygous markers
2: Genotyping score given to SS homozygous markers
3: Genotyping score given to heterozygous markers
-: Genotype missing

CHR

MARKER NAME

6941_3

6941_4

6941_5

6942_1

6942_4

6942_5

6943_1

6943_3

6943_4

6943_6

BN

SS

SSHET

1d1rat1672222222222123
1d1rat2342222222222123
1d1rat2652222222222123
1d1rat472222222222123
1d1rat732222222222123
1d1rat892222222222123
2d2rat1142222222222123
2d2rat142222222222123
2d2rat202222222-22123
2d2mit352222222222123
2d2rat149222-222222123
2d2rat652222222222123
3d3mgh82222222222123
3d3rat1892222222222123
3d3rat862222222222123
3d3rat2172222222-221-3
3d3rat12222222222123
4d4rat22222222222123
4d4rat142222222222123
4d4rat752222222222123
4d4rat562222222222123
4d4rat11222222222-2123
5d5mgh12222222222123
5d5rat84222222222212-
5d5rat882222222222123
5d5mit52222222222123
5d5rat332222222222123
5d5rat502222222222123
6d6rat672222222222123
6d6rat9622222---2----
6d6rat1342222222222123
6d6rat982222222222123
6d6mgh92222222222123
6d6rat752222222222123
7d7rat1132222222-22123
7d7rat832222222222-23
7d7rat142222222222123
7d7rat942222222222123
8d8rat562222222222123
8d8mit22222222222123
8d8rat302222222222123
8d8rat812222222222123
9d9rat88-------------
9d9rat302222222222123
9d9rat982222222222123
9d9rat52222222222123
9d9rat1082222222222123
10d10rat962222222222123
10d10rat732222222222123
10d10rat1072222222222123
10d10mgh42222222222123
10d10rat1352222222222123
11d11rat322222222222123
11d11rat342222222222123
11d11rat762222222222123
11d11rat222222222222123
12d12arb132222222222123
12d12rat92222222222123
12d12rat792222222222123
12d12rat492222222222123
13d13mgh132222222222123
13d13rat882222222222123
13d13rat332222222222123
13d13rat1922222222222123
14d14rat482222222222123
14d14mit32222222222123
14d14rat212222222222123
14d14rat942222222222123
15d15mit2222-222222123
15d15rat132222222-22123
15d15mgh52222222222123
15d15rat292222222222123
16d16rat212222222222123
16d16rat82222222222123
16d16rat722222222222123
16d16rat142222222222123
17d17rat532222222222123
17d17rat112222222222123
17d17rat362222222222123
17d17rat522222222222123
18d18rat172222222-22123
18d18rat502222222222123
18d18rat1012222222222123
18d18mit132222222222123
19d19rat322222222222-23
19d19rat252222222222123
19d19mit2222222222--23
19d19rat602222222222123
20d20rat462222222222123
20d20mgh52222222222123
20d20rat102222222222123
20d20mgh12222222222123
21dxrat492222222222123
21dxmgh82222222222123
21dxrat662222222222123
21dxrat10422222222221-3