Strain & Genotype Data Description


SS-6BN/Mcwi

Genetic characteristics of the SS-6BN/Mcwi consomic strains studied.
Presented are the data from a total genome scan performed at a 20 cM interval. Chromosomes are shown in the first column. Genetic markers used are shown in the second column. The last 3 columns displays control DNA from BN, SS and het rats. Other columns display the results for DNA from individual progenitors of the animals studied and sent to CRL for distribution.
Table Legend:
BN: parental control DNA
SS: parental control DNA
HET: F1 Heterozygous DNA (from female)
1: Genotyping score given to BN homozygous markers
2: Genotyping score given to SS homozygous markers
3: Genotyping score given to heterozygous markers
-: Genotype missing

CHR

MARKER NAME

4789_10

4789_9

5207_4

5372_1

BN

SS

SSHET

1d1rat1672222123
1d1rat2342222123
1d1rat2652222123
1d1rat472222123
1d1rat732222123
1d1rat892222123
2d2rat1142222123
2d2rat142222123
2d2rat202222123
2d2mit352222123
2d2rat1492222123
2d2rat652222123
3d3mgh82222123
3d3rat1892222123
3d3rat862222123
3d3rat217222-123
3d3rat12222-23
4d4rat22222123
4d4rat14-222123
4d4rat752222123
4d4rat562222123
4d4rat1122222123
5d5mgh12222123
5d5rat84222212-
5d5rat882222123
5d5mit52222123
5d5rat332222123
5d5rat502222123
6d6rat671111123
6d6rat961-11123
6d6rat1341111123
6d6rat981111123
6d6mgh91111123
6d6rat751111123
7d7rat1132222123
7d7rat832222123
7d7rat142222123
7d7rat942222123
8d8rat56-22212-
8d8mit22222123
8d8rat302222123
8d8rat812222123
9d9rat882222123
9d9rat302222123
9d9rat982222123
9d9rat52222123
9d9rat1082222123
10d10rat962222123
10d10rat732222123
10d10rat1072222123
10d10mgh42222123
10d10rat1352222123
11d11rat322222123
11d11mit42222123
11d11rat762222123
11d11rat222222123
12d12arb132222123
12d12rat92222123
12d12rat792222123
12d12rat492222123
13d13mgh132222123
13d13rat882222123
13d13rat332222123
13d13rat1922222123
14d14rat482222123
14d14mit3222212-
14d14rat212222-23
14d14rat942222123
15d15mit22222123
15d15rat132222123
15d15mgh52222123
15d15rat29222-123
16d16rat212222123
16d16rat82222123
16d16rat7222221-3
16d16rat142222123
17d17rat532222123
17d17rat112222123
17d17rat362222123
17d17rat522222123
18d18rat172222123
18d18rat502222-23
18d18rat1012222123
18d18mit132222123
19d19rat322222123
19d19rat252222123
19d19mit22222123
19d19rat602222123
20d20rat462222123
20d20mgh52222123
20d20rat102222123
20d20mgh12222123
21dxrat49222-123
21dxmgh82222123
21dxrat662222123
21dxrat1042222123