Strain & Genotype Data Description


SS-2BN/Mcwi

Genetic characteristics of the SS-2BN/Mcwi consomic strains studied.
Presented are the data from a total genome scan performed at a 20 cM interval. Chromosomes are shown in the first column. Genetic markers used are shown in the second column. The last column displays control DNA from het rats. Other columns display the results for DNA from individual progenitors of the animals studied and sent to CRL for distribution.
Table Legend:
BN: parental control DNA
SS: parental control DNA
HET: F1 Heterozygous DNA (from female)
1: Genotyping score given to BN homozygous markers
2: Genotyping score given to SS homozygous markers
3: Genotyping score given to heterozygous markers
-: Genotype missing

CHR

MARKER NAME

4047_1

4852_11

4853_5

5772_8

5773_1

5810_6

6058_1

6058_4

6058_6

6058_9

6059_2

6059_9

6059_11

7355_1

7355_3

7356_2

7356_4

7363_6

SSHET

1d1rat1672222222222222222223
1d1rat2342222222222222222223
1d1rat2652222222222222222223
1d1rat472222222222222222223
1d1rat732222222222222222223
1d1rat892222222222222222223
2d2rat1141111111111111111113
2d2rat141111111111111111113
2d2mit351111111111111111113
2d2rat1491111111111111111113
2d2rat651111111111111111113
3d3mgh82222222222222222223
3d3rat1892222222222222222223
3d3rat86222222--22222222223
3d3rat2172222222222222222223
3d3rat12222222222222222223
4d4rat22222222222222222223
4d4rat14222222--22---222223
4d4rat752222222222222222223
4d4rat562222222222222222223
4d4rat2022222222222222222223
5d5mgh12222222222222222223
5d5rat842222222222222222223
5d5rat882222222222222222223
5d5mit52222222222222222223
5d5rat332222222222222222223
5d5rat502222222222222222223
6d6rat67-222222222222222223
6d6rat9622222-2222222222223
6d6rat1342222222222222222223
6d6rat982222222222222222223
6d6mgh92222222222222222223
6d6rat752222222222222222223
7d7rat1132222222222222222223
7d7rat832222222222222222223
7d7rat142222222222222222223
7d7rat942222222222222222223
8d8rat5622-2222222222222223
8d8mit22222222222222222223
8d8rat302222222222222222223
8d8rat812222222222---222223
9d9rat882222222222222222223
9d9rat302222222222222222223
9d9rat98-222222222222222223
9d9rat522222222--222222223
9d9rat1082222222222222222223
10d10rat962222222222222222223
10d10rat1132222222222222222223
10d10rat732222222222222222223
10d10rat1072222222222222222223
10d10mgh42222222222222222223
10d10rat1352222222222222222223
11d11rat322222222222222222223
11d11mit42222222222222222223
11d11rat762222222222222222223
11d11rat222222222222222222223
12d12arb132222222222222222223
12d12rat92222222222222222223
12d12rat492222222222222222223
13d13mgh132222222222222222223
13d13rat882222222222222222223
13d13rat332222222222222222223
13d13rat1922222222222222222223
14d14rat12222222222222222223
14d14mit32222222222222222223
14d14rat212222222222222222223
14d14rat942222222222222222223
15d15mit22222222222222222223
15d15rat132222222222222222223
15d15mgh52222222222222222223
15d15rat292222222222222222223
16d16rat212222222222222222223
16d16rat82222222222222222223
16d16rat722222222222222222223
16d16rat142222222222222222223
17d17rat532222222222222222223
17d17rat112222222222222222223
17d17rat362222222222222222223
17d17rat5222222222222222222-3
18d18rat172222222222---222223
18d18rat852222222222222222223
18d18rat272222222222222222223
18d18mit132222222222222222223
19d19rat322222222222222222223
19d19rat252222222222222222223
19d19mit22222222222222222223
19d19rat602222222222222222223
20d20rat12222222222222222223
20d20mgh52222222222222222223
20d20rat102222222222222222223
20d20mgh12222222222222222223
21dxrat492222222222222222223
21dxmgh82222222222222222223
21dxrat66222-222222222--2223
21dxrat1042222222222222222223