Strain & Genotype Data Description


SS-20BN/Mcwi

Genetic characteristics of the SS-20BN/Mcwi consomic strain studied.
Presented are the data from a total genome scan performed at a 20 cM interval. Genetic markers used are shown in the first column. The last column displays control DNA from het rats. Other columns display the results for DNA from individual progenitors of the animals used by the Phenotyping Core and sent to CRL for distribution.
Table Legend:
BN: parental control DNA
SS: parental control DNA
HET: F1 Heterozygous DNA (from female)
1: Genotyping score given to BN homozygous markers
2: Genotyping score given to SS homozygous markers
3: Genotyping score given to heterozygous markers
-: Genotype missing

CHR

MARKER NAME

3904_1

3904_2

3904_3

3904_4

3904_6

3904_7

3904_8

3904_9

3905_1

3905_2

3905_3

3905_4

3928_1

3928_2

3928_5

3928_6

SSHET

1d1rat16722222222222222223
1d1rat23422222222222222223
1d1rat26522222222222222223
1d1rat4722222222222222223
1d1rat7322222222222222223
1d1rat8922222222222222223
2d2rat11422222222222222223
2d2rat1422222222222222223
2d2mit3522222222222222223
2d2rat14922222222222222223
2d2rat6522222222222222223
3d3mgh822222222222222223
3d3rat18922222222222222223
3d3rat8622222222222222223
3d3rat21722222222222222223
3d3rat122222222222222223
4d4rat222222222222222223
4d4rat142222222222222222-
4d4rat7522222222222222223
4d4rat5622222222222222223
4d4rat20222222222222222223
5d5mgh122222222222222223
5d5rat842222222222222222-
5d5rat162222222222222222-
5d5rat8822222222222222223
5d5mit522222222222222223
5d5rat332222222222222222-
5d5rat502222222232222222-
6d6rat672222222222222222-
6d6rat962222222222222222-
6d6rat9822222222222222223
6d6mgh92222222222222222-
6d6rat7522222222222222223
7d7rat11322222222222222223
7d7rat8322222222222222223
7d7rat1422222222222222223
7d7rat9422222222222222223
8d8rat5622222222222222223
8d8mit222222222222222223
8d8rat3022222222222222223
8d8rat8122222222222222-23
9d9rat8822222222222222223
9d9rat3022222222222222223
9d9rat9822222222222222223
9d9rat522222222222222223
9d9rat10822222222222222223
10d10rat9622222222222222223
10d10rat7322222222222222223
10d10rat10722222222222222223
10d10mgh422222222222222223
10d10rat135222-222-22222222-
11d11rat3222222222222222223
11d11mit422222222222222223
11d11rat7622222222222222223
11d11rat2222222222222222223
12d12arb1322222222222222223
12d12rat922222222222222223
12d12rat7922222222222222223
12d12rat4922222222222222223
13d13mgh1322222222222222223
13d13rat8822222222222222223
13d13rat3322222222222222223
13d13rat19222222222222222223
14d14rat4822222222222222223
14d14mit32222222222222222-
14d14rat2122222222222222223
14d14rat9422222222222222223
15d15mit222222222222222223
15d15rat1322222222222222223
15d15mgh522222222222222223
15d15rat2922222222222222223
16d16rat2122222222222222223
16d16rat822222222222222223
16d16rat7222222222222222223
16d16rat1422222222222222223
17d17rat5322222222222222223
17d17rat1122222222222222223
17d17rat3622222222222222223
17d17rat5222222222222222223
18d18rat17-222-222222222223
18d18rat5022222222222222223
18d18rat10122222222222222223
18d18mit1322222222222222223
19d19rat3222222222222222223
19d19rat2522222222222222223
19d19mit222222222222222223
19d19rat6022222222222222223
20d20rat4611111111111111113
20d20mgh511111111111111113
20d20rat1011111111111111113
20d20mgh122222222222222223
21dxrat49222222222222-222-
21dxmgh822222222222222221
21dxrat6622222222222222221
21dxrat10422222222222222221