Strain & Genotype Data Description


SS-1BN/Mcwi

Genetic characteristics of the SS-1BN/Mcwi consomic strains studied.
Presented are the data from a total genome scan performed at a 20 cM interval. Chromosomes are shown in the first column. Genetic markers used are shown in the second column. The last column displays control DNA from het rats. Other columns display the results for DNA from individual progenitors of the animals studied and sent to CRL for distribution.
Table Legend:
BN: parental control DNA
SS: parental control DNA
HET: F1 Heterozygous DNA (from female)
1: Genotyping score given to BN homozygous markers
2: Genotyping score given to SS homozygous markers
3: Genotyping score given to heterozygous markers
-: Genotype missing

CHR

MARKER NAME

38320_2

38320_4

38320_7

38386_1

38386_2

38386_5

38386_6

38386_7

1d1rat16711111111
1d1rat411111111
1d1rat25011111111
1d1rat23411111111
1d1rat26511111111
1d1rat4711111111
1d1rat7311111111
1d1rat8911111111
2d2rat11422-22222
2d2rat1422222222
2d2rat2022222222
2d2mit3522222222
2d2rat14922222222
2d2rat6522222222
3d3mgh822222222
3d3rat18922222222
3d3rat8622222222
3d3rat21722222222
3d3rat122222222
4d4rat2-2-22222
4d4rat1422222222
4d4rat7522222222
4d4rat5622222222
4d4rat11222222222
5d5mgh12222222-
5d5rat8422222222
5d5rat8822222222
5d5mit522222222
5d5rat33-2222222
5d5rat5022222222
6d6rat6722222222
6d6rat9622222222
6d6rat13422222222
6d6rat9822222222
6d6mgh922222222
6d6rat7522222222
7d7rat1132222-222
7d7rat8322222222
7d7rat1422222222
7d7rat9422222222
8d8rat5622222222
8d8mit222222222
8d8rat3022222222
8d8rat8122222222
9d9rat88-22--222
9d9rat3022222222
9d9rat9822222222
9d9rat422222222
9d9rat10822222222
10d10rat9622222222
10d10rat732-22222-
10d10rat10722222222
10d10mgh422-22222
10d10rat10522222222
11d11rat322222222-
11d11rat3422222222
11d11rat7622222222
11d11rat2222222222
12d12arb13222222-2
12d12rat922222222
12d12rat7922222222
12d12rat4922222222
13d13mgh1322222222
13d13rat8822222222
13d13rat3322222222
13d13rat19222222222
14d14rat2122222222
14d14rat9422222222
14d14rat2422222222
14d14rat1022222222
15d15mit222222222
15d15rat132-222222
15d15mgh52222-222
15d15rat29222-2222
16d16rat2122222222
16d16rat822222222
16d16rat7222222222
16d16rat1422222222
17d17rat53-2222222
17d17rat1122222222
17d17rat3622222222
17d17rat5222222222
18d18rat1722222222
18d18rat5022222222
18d18rat10122222222
18d18mit1322222222
19d19rat3222222222
19d19rat3522222222
19d19mit22222-222
19d19rat6022222222
20d20rat1-2222222
20d20mgh522222222
20d20rat1022222222
20d20mgh1-2222222
21dxrat4922222222
21dxmgh822222222
21dxrat662222-222
21dxrat10422222222