Strain & Genotype Data Description


SS-15BN/Mcwi

Genetic characteristics of the SS-15BN consomic strains studied.
Presented are the data from a total genome scan performed at a 20 cM interval. Genetic markers used are shown in the first column. The last columns display BN control DNA. Other columns display the results for DNA from individual progenitors of the animals phenotyped.
Table Legend:
BN: parental control DNA
SS: parental control DNA
HET: F1 Heterozygous DNA (from female)
1: Genotyping score given to BN homozygous markers
2: Genotyping score given to SS homozygous markers
3: Genotyping score given to heterozygous markers
-: Genotype missing

CHR

MARKER NAME

17044_4

18972_4

20860_1

20860_2

20860_3

20860_4

20860_5

20860_6

20860_7

20860_8

20860_9

20860_10

20860_11

20996_1

20996_2

20996_3

20996_4

20996_5

20996_6

20996_7

20996_8

BN

1d1rat1672222222222222222222221
1d1rat2342222222222222222222221
1d1rat2652222222222222222222221
1d1rat472222222222222222222221
1d1rat732222222222222222222221
1d1rat892222222222222222222221
2d2rat1142222222222222222222221
2d2rat1422222222222222222--221
2d2rat202222222222222222222221
2d2mit3522--222222222222222221
2d2rat1492222222222222222222221
2d2rat652222222222222222222221
3d3mgh82222222222222222222221
3d3rat1892222222222222222222221
3d3rat862222222222222222222221
3d3rat2172222222222222222222221
3d3rat12222222222222222222221
4d4rat22222222222222222222221
4d4rat14-2--22--22--222222222-
4d4rat752222222222222222222221
4d4rat56222222222222222222222-
4d4rat1122222222222222222222221
5d5mgh12222222222222222222221
5d5rat842222222222222222222221
5d5rat882222222222222222222221
5d5mit52222222222222222222221
5d5rat332222222222222222222221
5d5rat502222222222222222222221
6d6rat672222222222222222222221
6d6rat962222222222222222222221
6d6rat1342222222222222222222221
6d6rat982222222222222222222221
6d6mgh9222222222222-222222221
6d6rat752222222222222222222221
7d7rat1132222222222222222222221
7d7rat832222222222222222222221
7d7rat142222222222222222222221
7d7rat94222222222222222222222-
8d8rat562222222222222222222221
8d8mit22222222222222222222221
8d8rat302222222222222222222221
8d8rat812222222222222222222221
9d9rat882222222222222222222221
9d9rat302222222222222222222221
9d9rat982222222222222222222221
9d9rat4222222222222-222222221
9d9rat1082222222222222222222221
10d10rat962222222222222222222221
10d10rat732222222222222222222221
10d10rat1072222222222222222222221
10d10mgh42222222222222222222221
10d10rat1052222222222222222222221
11d11rat322222222222222222222221
11d11rat342222222222222222222221
11d11rat762222222222222222222221
11d11rat222222222222222222222221
12d12arb132222222222222222222221
12d12rat92222222222222222222221
12d12rat792222222222222222222221
12d12rat492222222222222--2222221
13d13mgh132222222222222222222221
13d13rat882222222222222222222221
13d13rat332222222222222222222221
13d13rat1922222222222222222222221
14d14rat24---------------------1
14d14rat10222222222222-222222221
14d14rat21222222222222-222222221
14d14rat942222222222222222222221
15d15mit211--111111111111111111
15d15rat131111111111111111111111
15d15mgh51111111111111111111111
15d15rat291111111111111111111--1
16d16rat212222222222222222222221
16d16rat82222222222222222222221
16d16rat722222222222222222222221
16d16rat142222222222222222222221
17d17rat532222222222222222222221
17d17rat112222222222222222222221
17d17rat362222222222222222222221
17d17rat522222222222222222222221
18d18rat172222222222222222222221
18d18rat502222222222222222222221
18d18rat101222222222222222222222-
18d18mit132222222222222222222221
19d19rat322222222222222222222221
19d19rat352-22222222222222222221
19d19mit22222222222222222222221
19d19rat60----------------------
20d20rat12222222222222222222221
20d20mgh52222222222222222222221
20d20rat10222222222222222--22221
20d20mgh12222222222222222222221
21dxrat492222222222222222222221
21dxmgh82222222222222222222221
21dxrat66222222222222222222222-
21dxrat1042222222222222222222221