Strain & Genotype Data Description


SS-13BN/Mcwi

Genetic characteristics of the SS-13BN/Mcwi consomic strain studied.
Presented are the data from a total genome scan performed at a 20 cM interval. Chromosomes are shown in the first column. Genetic markers used are shown in the second column. The last column displays control DNA from het rats. Other columns display the results for DNA from individual progenitors of the animals phenotyped and sent to CRL for distribution.
Table Legend:
BN: parental control DNA
SS: parental control DNA
HET: F1 Heterozygous DNA (from female)
1: Genotyping score given to BN homozygous markers
2: Genotyping score given to SS homozygous markers
3: Genotyping score given to heterozygous markers
-: Genotype missing

CHR

MARKER NAME

6546_1

6546_11

6546_2

6546_4

7200_3

7200_5

7200_7

SSHET

1d1rat167-2222223
1d1rat23422222223
1d1rat26522222223
1d1rat4722222223
1d1rat7322222223
1d1rat8922222223
2d2rat11422222223
2d2rat1422222223
2d2mit352-222223
2d2rat14922222223
2d2rat6522222223
3d3mgh822222223
3d3rat18922222223
3d3rat86222222-3
3d3rat21722222223
3d3rat122222-23
4d4rat222222223
4d4rat1422222223
4d4rat7522222223
4d4rat20222222223
5d5mgh122222223
5d5rat8422222223
5d5rat8822222223
5d5mit522222223
5d5rat3322222223
5d5rat5022222223
6d6rat6722222223
6d6rat9622222223
6d6rat9822222-23
6d6mgh9-2222223
6d6rat7522222223
7d7rat11322222223
7d7rat8322222223
7d7rat14222-2223
7d7rat9422222223
8d8rat5622222223
8d8mit222222223
8d8rat3022222223
8d8rat722222-223
9d9rat3022222223
9d9rat9822222223
9d9rat522222223
9d9rat10822222223
10d10rat9622222223
10d10rat11322222223
10d10rat7322222223
10d10rat10722222223
10d10mgh42222222-
10d10rat13522222223
11d11rat3222222223
11d11mit422222223
11d11rat7622222223
11d11rat2222222223
12d12arb1322222223
12d12rat922222-23
12d12rat4922222223
13d13mgh13-1111113
13d13rat8811111113
13d13rat3311111113
13d13rat19211111113
14d14rat122222-23
14d14mit32222222-
14d14rat2122222223
14d14rat9422222223
15d15mit222222223
15d15rat1322222223
15d15mgh522222223
15d15rat292-222223
16d16rat212222--23
16d16rat822222223
16d16rat7222222223
17d17rat5322222223
17d17rat1122222223
17d17rat3622222223
17d17rat5222222223
18d18rat8522222223
18d18rat2722222223
18d18mit1322222223
19d19rat3222222223
19d19rat2522222223
19d19mit222222223
19d19rat6022222223
20d20rat122222223
20d20mgh522222223
20d20rat1022222223
20d20mgh122222223
21dxrat4922222221
21dxmgh822222221
21dxrat66222-2221
21dxrat10422222221