Strain & Genotype Data Description


FHH-9BN/Mcwi

Genetic characteristics of the FHH-9BN consomic strains studied.
Presented are the data from a total genome scan performed at a 20 cM interval. Genetic markers used are shown in the first column. The last columns display control DNA from BN and FHH het rats. Other columns display the results for DNA from individual progenitors of the animals used by the Phenotyping Core.
Table Legend:
BN: parental control DNA
FHH: parental control DNA
HET: F1 Heterozygous DNA (from female)
1: Genotyping score given to BN homozygous markers
2: Genotyping score given to FHH homozygous markers
3: Genotyping score given to heterozygous markers
-: Genotype missing

CHR

MARKER NAME

23171_3

23171_4

23171_5

23171_9

BN

FHHHet

1d1rat167222213
1d1rat234----13
1d1rat265222213
1d1rat47222213
1d1rat73222213
1d1rat89222213
2d2rat114222213
2d2rat14222213
2d2rat20222213
2d2mit3522221-
2d2rat149222213
2d2rat6522--23
3d3mgh8222213
3d3rat189--2213
3d3rat86222213
3d3rat217222213
3d3rat1222213
4d4rat2--2213
4d4rat14----1-
4d4rat75222213
4d4rat5622221-
4d4rat11222221-
5d5mgh1222213
5d5rat8422221-
5d5rat88222213
5d5mit5222213
5d5rat33222213
5d5rat50222213
6d6rat67--2213
6d6rat96222213
6d6rat13422--13
6d6rat98----13
6d6mgh922----
6d6rat3--2213
7d7rat113----13
7d7rat83--221-
7d7rat14222213
7d7rat94222213
8d8rat5622221-
8d8rat44222213
8d8rat3022221-
8d8rat81222213
9d9rat88111113
9d9rat30111113
9d9rat98111113
9d9rat411111-
9d9rat10811--13
10d10rat96222213
10d10rat73----1-
10d10rat107--2213
10d10mgh422--13
10d10rat105222213
11d11rat3222221-
11d11rat23222213
11d11rat76222213
11d11rat22222213
12d12arb1322221-
12d12rat9222213
12d12rat79222213
12d12rat49222213
13d13mgh13222213
13d13rat882222--
13d13rat49222213
14d14rat2422----
14d14rat10222213
14d14rat94----1-
15d15mit2--2213
15d15rat84222213
15d15mgh5222213
15d15rat29222213
16d16rat21222213
16d16rat8222213
16d16rat72222213
16d16rat14222213
17d17rat532222-3
17d17rat1122221-
17d17rat34222213
17d17rat52222213
18d18rat17--2213
18d18rat50222213
18d18rat101222213
18d18mit12222213
19d19rat3222--13
19d19rat35222213
19d19mit2222213
19d19rat60--22--
20d20rat1222213
20d20mgh5222213
20d20rat10222213
20d20mgh122221-
21dxrat7922221-
21dxmgh822221-
21dxrat6622221-
21dxrat104222212