Strain & Genotype Data Description


FHH-8BN/Mcwi

Genetic characteristics of the FHH-8BN consomic strains studied.
Presented are the data from a total genome scan performed at a 20 cM interval. Chromosomes are shown in the first column. Genetic markers used are shown in the second column. The last column displays control DNA from het rats. Other columns display the results for DNA from individual progenitors of the animals used by the Phenotyping Core and sent to CRL.
Table Legend:

BN: parental control DNA
FHH: parental control DNA
HET: F1 Heterozygous DNA (from female)
1: Genotyping score given to BN homozygous markers
2: Genotyping score given to FHH homozygous markers
3: Genotyping score given to heterozygous markers
-: Genotype missing

CHR

MARKER NAME

17035_3

17035_4

17035_5

17035_6

17035_7

17035_8

17035_9

17035_10

17035_11

17035_12

17035_13

FHH_HET

1d1rat167222222222223
1d1rat23422----222223
1d1rat265222222222223
1d1rat47222222222223
1d1rat7322222222222-
1d1rat89222222222223
2d2rat114222222222223
2d2rat14222222222223
2d2rat20222222--2223
2d2mit35222222222223
2d2rat149222222222223
2d2rat65222222222223
3d3mgh8222222222223
3d3rat189222222222223
3d3rat86222222222223
3d3rat217222222222223
3d3rat1222222222223
4d4rat222--22222223
4d4rat14--------22--
4d4rat752222222222-3
4d4rat56222222222223
4d4rat72--2222222223
5d5mgh1222222222223
5d5rat84--2222222223
5d5rat88222222222223
5d5mit522222222222-
5d5rat33222222222223
5d5rat50222222222223
6d6rat67222222222223
6d6rat96--2222222223
6d6rat98222222----23
6d6mgh9222222222223
6d6rat3222222222223
7d7rat113222222222223
7d7rat83222222222223
7d7rat14----2222222-
7d7rat942222222222-3
8d8rat56--1111111113
8d8mit2111111111113
8d8rat30111111111113
8d8rat811111-------3
9d9rat88------222223
9d9rat302222--22222-
9d9rat98------22222-
9d9rat5222222222223
9d9rat10822222222222-
10d10rat962222--222223
10d10rat73222222222223
10d10rat107222222222223
10d10mgh4222222222223
10d10rat135------------
11d11rat32222222222223
11d11rat23222222222223
11d11rat76222222222223
11d11rat22222222222223
12d12arb13222222222223
12d12rat9222222222223
12d12rat7922--22222223
12d12rat49222222222223
13d13mgh13222222222223
13d13rat88----22--22-3
13d13rat33222222222223
13d13rat49222222222223
14d14rat2422222222222-
14d14rat1022222222222-
14d14rat21222222222223
14d14rat94--2222222223
15d15mit2----2222--2-
15d15rat84--2222222223
15d15mgh5--22222222--
15d15rat2922222222222-
16d16rat21222222222223
16d16rat8222222222223
16d16rat72222222222223
16d16rat14222222222223
17d17rat53222222222223
17d17rat11222222222223
17d17rat34222222222223
17d17rat52222222222223
18d18rat1722--22222223
18d18rat50222222222223
18d18rat101222222222223
18d18mit12222222222223
19d19rat32222222222223
19d19rat252222--222223
19d19mit2222222222223
19d19rat60222222222223
20d20rat46222222222223
20d20mgh522--22222223
20d20rat1022--22222223
20d20mgh1222222222223
21dxrat49222222222221
21dxmgh822--22222221
21dxrat66----22222221
21dxrat104222222----21