Strain & Genotype Data Description


FHH-7BN/Mcwi

Genetic characteristics of the FHH-7BN consomic strains studied.
Presented are the data from a total genome scan performed at a 20 cM interval. Genetic markers used are shown in the first column. The last columns displays control DNA from FHH and het rats. Other columns display the results for DNA from individual progenitors of the animals used by the Phenotyping Core.
Table Legend:
BN: parental control DNA
FHH: parental control DNA
HET: F1 Heterozygous DNA (from female)
1: Genotyping score given to BN homozygous markers
2: Genotyping score given to FHH homozygous markers
3: Genotyping score given to heterozygous markers
-: Genotype missing

CHR

MARKER NAME

17048_5

17048_6

17049_11

17049_1

17049_2

17049_3

17049_4

17049_5

17049_6

17049_7

17049_8

17049_9

17049_10

FHH

FHHHET

1d1rat167222222222222223
1d1rat23422222222222--2-
1d1rat265222222222222223
1d1rat47222222222--2223
1d1rat73222222222222223
1d1rat89--22222--2222-3
2d2rat11422222222222--23
2d2rat1422222222222222-
2d2rat20222222222--2223
2d2mit3522222222222--23
2d2rat149-----2222222223
2d2rat65-----22------2-
3d3mgh8--2--2222------
3d3rat189222222222--2223
3d3rat86--222222222222-
3d3rat217--22222--22222-
3d3rat1222222222222223
4d4rat2222222222222223
4d4rat14222222222222223
4d4rat75222222222222223
4d4rat56222222222222223
4d4rat72222222222222223
5d5mgh1222--2222222223
5d5rat84222222222222223
5d5rat88222222222222223
5d5mit5222222222222223
5d5rat33222222222222223
5d5rat50222222222222223
6d6rat67222222222222223
6d6rat96222222222222223
6d6rat134--22222--222223
6d6rat98222222222--222-
6d6mgh9222222222222223
6d6rat322222--22222223
7d7rat113--1--1111111123
7d7rat83111111111111123
7d7rat14--1111111111123
7d7rat941111111111111-3
8d8rat56222222222222223
8d8mit2222222222222223
8d8rat3022222--22222223
8d8rat81222222222222223
9d9rat88222222222222223
9d9rat3022222222222222-
9d9rat98222222222222223
9d9rat522222222222--23
9d9rat108222222222222223
10d10rat96222222222222223
10d10rat73222222222222223
10d10rat107222222222222223
10d10mgh4222222222222223
10d10rat105222222222222223
11d11rat32222222222222223
11d11rat23--2--2222222223
11d11rat76222222222222223
11d11rat22222222222222223
12d12arb13222222222222223
12d12rat922-2222222222-3
12d12rat7922-2222222222--
12d12rat49222222222--2223
13d13mgh13222--222222---3
13d13rat88222222222222223
13d13rat33222222222222223
13d13rat49222222222222223
14d14rat24222222222222223
14d14rat1022-2222222222-3
14d14rat21---------------
14d14rat94222--2222222223
15d15mit2222222222222223
15d15rat84222222222222223
15d15mgh5222222222222223
15d15rat29222222222222223
16d16rat21222222222222223
16d16rat8222222222222223
16d16rat72222222222--2223
16d16rat14222222222222223
17d17rat53222222222222223
17d17rat11222222222222223
17d17rat34222222222222223
17d17rat52222222222222223
18d18rat17--2222222222223
18d18rat50222222222222223
18d18rat101222222222--2223
18d18mit2222222222222223
19d19rat32--2222222222223
19d19rat25222222222222223
19d19mit2--222222222222-
19d19rat60--22222--222223
20d20rat46222222222222223
20d20mgh522-22222222--23
20d20rat10222222222222223
20d20mgh1--2222222222223
21dxrat49222222222222221
21dxmgh8222222222222221
21dxrat662222222222222-1
21dxrat104--2222222222221