Strain & Genotype Data Description


FHH-6BN/Mcwi

Genetic characteristics of the FHH-6BN consomic strains studied.
Presented are the data from a total genome scan performed at a 20 cM interval. Genetic markers used are shown in the first column. The last columns displays control DNA from BN rats. Other columns display the results for DNA from individual progenitors of the animals used by the Phenotyping Core.
Table Legend:
BN: parental control DNA
FHH: parental control DNA
HET: F1 Heterozygous DNA (from female)
1: Genotyping score given to BN homozygous markers
2: Genotyping score given to FHH homozygous markers
3: Genotyping score given to heterozygous markers
-: Genotype missing

CHR

MARKER NAME

20461_1

20461_2

20461_3

20461_4

20461_5

20461_6

20461_7

20461_8

20461_9

20462_1

20462_2

20462_3

20462_4

20462_5

20462_6

BN

1d1rat1672222222222222221
1d1rat2342222222222222221
1d1rat265222222-222222221
1d1rat472222222222222221
1d1rat732222222-22222--1
1d1rat892222222-22222221
2d2rat1142222222222222221
2d2rat142222222222222221
2d2rat20222-2-2222222221
2d2mit352222222222222221
2d2rat1492222222222222221
2d2rat652222222222222221
3d3mgh82222222222222221
3d3rat1892222222222222221
3d3rat862222222222222221
3d3rat2172222222222222221
3d3rat12222222222222221
4d4rat2222222-222222221
4d4rat142222222222222221
4d4rat752222222222222221
4d4rat562222222222222221
4d4rat1122222222222222221
5d5mgh12222222222222221
5d5rat842222222222222221
5d5rat882222222222222221
5d5mit52222222222222221
5d5rat332222222222222221
5d5rat502222222222222221
6d6rat671111111111111111
6d6rat961111111111111111
6d6rat1341111111111111111
6d6rat981111111111111111
6d6mgh91111111111111111
6d6rat31111111111111111
7d7rat1132222222222222221
7d7rat832222222222222221
7d7rat142222222222222221
7d7rat94--22222222222221
8d8rat562222222222222221
8d8mit22222222222222221
8d8rat302222222222222221
8d8rat812222222222222221
9d9rat882222222222222221
9d9rat302222222222222221
9d9rat982222222222222--1
9d9rat5--222-22222--221
9d9rat1082222222222222221
10d10rat962222222222222221
10d10rat732222222222222221
10d10rat1072222222222222221
10d10mgh4222222222--22221
10d10rat1052222222222222221
11d11rat322222222222222221
11d11rat23222222222222222-
11d11rat76222222222222222-
11d11rat22---2222222222221
12d12arb132222222222222221
12d12rat92222222222222221
12d12rat79222222222--22221
12d12rat492222222222222221
13d13mgh132222222222222221
13d13rat88----222222222221
13d13rat332222222222222221
13d13rat492222222222222221
14d14rat242222222222222221
14d14rat102222222222222221
14d14rat212222222222222221
14d14rat942222222222222221
15d15mit2--22222222222221
15d15rat842222222222222221
15d15mgh52222222222222221
15d15rat292222222222222221
16d16rat212222222222222221
16d16rat82222222222222221
16d16rat722222222222222221
16d16rat142222222222222221
17d17rat532222222222222221
17d17rat112222222222222221
17d17rat342222222222222221
17d17rat522222222222222221
18d18rat172222222222222221
18d18rat502222222222222221
18d18rat1012222222222222221
18d18mit122222222222222221
19d19rat322222222222222221
19d19rat25--22222222222221
19d19mit222222222222--221
19d19rat60--22222222222221
20d20rat1222222222--2222-
20d20mgh52222222222222221
20d20rat102222222222222221
20d20mgh1--2222222----221
21dxrat492222222222222221
21dxmgh8--22222222222221
21dxrat662222222222222221
21dxrat104222222222----221