Strain & Genotype Data Description


FHH-5BN/Mcwi

Genetic characteristics of the FHH-5BN consomic strains studied.
Presented are the data from a total genome scan performed at a 20 cM interval. Genetic markers used are shown in the first column. The last column displays control DNA from FHH het rats. Other columns display the results for DNA from individual progenitors of the animals used by the Phenotyping Core.
Table Legend:
BN: parental control DNA
FHH: parental control DNA
HET: F1 Heterozygous DNA (from female)
1: Genotyping score given to BN homozygous markers
2: Genotyping score given to FHH homozygous markers
3: Genotyping score given to heterozygous markers
-: Genotype missing

CHR

MARKER NAME

22397_4

19597_3

19597_6

19597_7

19597_10

21241_1

21241_3

21241_5

21241_6

21241_11

22499_1

22499_2

22499_5

FHHHET

1d1rat16722222222222223
1d1rat2342222222222222-
1d1rat2652222222222222-
1d1rat4722222222222223
1d1rat7322222222222223
1d1rat8922222222222223
2d2rat11422222222222223
2d2rat1422222222222223
2d2rat202222222222---3
2d2mit3522222222222223
2d2rat14922222222222223
2d2rat6522222222222223
3d3mgh822222222222223
3d3rat18922222222222223
3d3rat8622222222222223
3d3rat21722222222222223
3d3rat122222222222223
4d4rat222222222222223
4d4rat1422222222222223
4d4rat7522222222222223
4d4rat5622222222222223
4d4rat11222222222222223
5d5mgh111111111111113
5d5rat8411111111111113
5d5rat8811111111111113
5d5mit511111111111113
5d5rat3311111111111113
5d5rat5011111111111113
6d6rat6722222222222223
6d6rat962-22-222222223
6d6rat13422222222222223
6d6rat9822222222222223
6d6mgh92-22-222222223
6d6rat322222222222223
7d7rat11322222222222223
7d7rat8322222222222223
7d7rat1422222222222223
7d7rat9422222222222223
8d8rat5622222222222223
8d8mit222222222222223
8d8rat3022222222222223
8d8rat812-22-222222223
9d9rat8822222222222223
9d9rat3022222222222223
9d9rat982-22-222222223
9d9rat422222222222223
9d9rat10822222222222223
10d10rat9622222222222223
10d10rat7322222222222223
10d10rat10722222222222223
10d10mgh422222222222223
10d10rat10522222222222223
11d11rat3222222222222223
11d11rat2322222222222223
11d11rat7622222222222223
11d11rat2222222222222223
12d12arb1322222222222223
12d12rat922222222222223
12d12rat7922222222222223
12d12rat4922222---222223
13d13mgh1322222222222223
13d13rat8822222222222223
13d13rat3322222222222223
13d13rat4922222222222223
14d14rat2422222222222223
14d14rat1022--2222222223
14d14rat2122222222222223
14d14rat9422222222222223
15d15mit222222222222223
15d15rat8422222222222223
15d15mgh522222---22---3
15d15rat2922222222222223
16d16rat212-22-222222223
16d16rat822222222222223
16d16rat7222222222222223
16d16rat1422222222222223
17d17rat5322222222222223
17d17rat1122222222222223
17d17rat342-------22----
17d17rat5222222222222223
18d18rat172-------------
18d18rat5022222222222223
18d18rat10122222222222223
18d18mit1222222222222223
19d19rat3222222222222223
19d19rat3522222222222223
19d19mit222--222222----
19d19rat6022222222222223
20d20rat122--222222222-
20d20mgh522222222222223
20d20rat1022222222222223
20d20mgh122222222222223
21dxrat7922222222222223
21dxmgh822222222222223
21dxrat66-2222222222223
21dxrat10422222222222223