Strain & Genotype Data Description


FHH-4BN/Mcwi

Genetic characteristics of the FHH-4BN consomic strains studied.
Presented are the data from a total genome scan performed at a 20 cM interval. Genetic markers used are shown in the first column. The last column displays control DNA from FHH het rats. Other columns display the results for DNA from individual progenitors of the animals used by the Phenotyping Core.
Table Legend:
BN: parental control DNA
FHH: parental control DNA
HET: F1 Heterozygous DNA (from female)
1: Genotyping score given to BN homozygous markers
2: Genotyping score given to FHH homozygous markers
3: Genotyping score given to heterozygous markers
-: Genotype missing

CHR

MARKER NAME

21249_2

21249_6

21908_1

21908_2

21908_3

21908_4

22086_1

22086_2

22086_3

22086_7

22086_8

22086_9

22086_10

22086_11

22086_12

FHHHET

1d1rat1672222222222222223
1d1rat234----22222222222-
1d1rat265222222222222222-
1d1rat472222222222222223
1d1rat732222222222222223
1d1rat892222222222222223
2d2rat1142222222222222223
2d2rat142222222222222223
2d2rat202222222222222223
2d2mit352222222222222223
2d2rat1492222222222222223
2d2rat65--22222222222223
3d3mgh82222222222222223
3d3rat1892222222222222223
3d3rat862222222222222223
3d3rat2172222222222222223
3d3rat12222222222222223
4d4rat21111111111111113
4d4rat141111111111111113
4d4rat751111111111111113
4d4rat561111111111111113
4d4rat1121111111111111113
5d5mgh12222222222222223
5d5rat842222222222222223
5d5rat882222222222222223
5d5mit52222222222222223
5d5rat332222222222222223
5d5rat502222222222222223
6d6rat672222222222222223
6d6rat962222222222222223
6d6rat1342222222222222223
6d6rat982222222222222223
6d6mgh92222222222222223
6d6rat32222222222222223
7d7rat1132222222222222223
7d7rat832222222222222223
7d7rat142222222222222223
7d7rat94--22222222222223
8d8rat562222222222222223
8d8mit22222222222222223
8d8rat302222222222222223
8d8rat812222222222222223
9d9rat882222222222222223
9d9rat302222222222222223
9d9rat982222222222222223
9d9rat42222222222222223
9d9rat1082222222222222223
10d10rat962222222222222223
10d10rat73--22222222222223
10d10rat1072222222222222223
10d10mgh42222222222222223
10d10rat1052222222222222223
11d11rat322222222222222223
11d11rat232222222222222223
11d11rat762222222222222223
11d11rat222222222222222223
12d12arb132222222222222223
12d12rat92222222222222223
12d12rat792222222222222223
12d12rat492222222222222223
13d13mgh1322--222222222223
13d13rat882222222222222223
13d13rat332222222222222223
13d13rat492222222222222223
14d14rat242222222222222223
14d14rat102222222222222-23
14d14rat212222222222222223
14d14rat942222222222222223
15d15mit22222222222222223
15d15rat842222222222222223
15d15mgh52222222222222223
15d15rat292222222222222223
16d16rat212222222222222223
16d16rat82222222222222223
16d16rat722222222222222223
16d16rat142222222222222223
17d17rat532222222222222223
17d17rat112222222222222223
17d17rat3422-----------22-
17d17rat522222222222222223
18d18rat17---------22-----
18d18rat502222222222222223
18d18rat1012222222222222223
18d18mit122222222222222223
19d19rat322222222222222223
19d19rat352222222222222223
19d19mit222-------222222-
19d19rat60--22222222222223
20d20rat12222--2222222-2-
20d20mgh52222222222222223
20d20rat102222222222222223
20d20mgh12222222222222223
21dxrat4922----2222222223
21dxmgh82222222222222223
21dxrat662222222222222223
21dxrat1042222222222222223