Strain & Genotype Data Description


FHH-3BN/Mcwi

Genetic characteristics of the FHH-3BN consomic strains studied.
Presented are the data from a total genome scan performed at a 20 cM interval. Genetic markers used are shown in the first column. The last columns display control DNA from BN and FHH het rats. Other columns display the results for DNA from individual progenitors of the animals used by the Phenotyping Core.
Table Legend:
BN: parental control DNA
FHH: parental control DNA
HET: F1 Heterozygous DNA (from female)
1: Genotyping score given to BN homozygous markers
2: Genotyping score given to FHH homozygous markers
3: Genotyping score given to heterozygous markers
-: Genotype missing

CHR

MARKER NAME

23096_6

23096_8

23096_9

BN

FHHHet

1d1rat16722213
1d1rat234---13
1d1rat26522213
1d1rat4722213
1d1rat7322213
1d1rat8922213
2d2rat11422213
2d2rat1422213
2d2rat2022213
2d2mit352221-
2d2rat14922213
2d2rat6522-23
3d3mgh811-13
3d3rat18911113
3d3rat8611113
3d3rat21711113
3d3rat111113
4d4rat222213
4d4rat14--21-
4d4rat7522213
4d4rat562221-
4d4rat1122221-
5d5mgh122213
5d5rat842221-
5d5rat8822213
5d5mit522213
5d5rat33---13
5d5rat5022213
6d6rat6722213
6d6rat9622213
6d6rat13422213
6d6rat98---13
6d6mgh9222--
6d6rat322213
7d7rat11322213
7d7rat832221-
7d7rat1422213
7d7rat9422213
8d8rat562221-
8d8rat4422213
8d8rat302221-
8d8rat8122213
9d9rat8822213
9d9rat3022213
9d9rat9822213
9d9rat42221-
9d9rat10822213
10d10rat9622213
10d10rat73--21-
10d10rat10722213
10d10mgh422213
10d10rat10522213
11d11rat322221-
11d11rat2322213
11d11rat7622213
11d11rat2222213
12d12arb132221-
12d12rat922213
12d12rat7922213
12d12rat4922213
13d13mgh1322213
13d13rat88222--
13d13rat4922213
14d14rat24222--
14d14rat1022213
14d14rat9422-1-
15d15mit222213
15d15rat8422213
15d15mgh522213
15d15rat2922213
16d16rat2122213
16d16rat822213
16d16rat7222213
16d16rat1422213
17d17rat53222-3
17d17rat112221-
17d17rat3422213
17d17rat5222213
18d18rat1722213
18d18rat5022213
18d18rat10122213
18d18mit1222213
19d19rat3222213
19d19rat3522213
19d19mit222213
19d19rat60222--
20d20rat122213
20d20mgh522213
20d20rat1022213
20d20mgh12221-
21dxrat792221-
21dxmgh82221-
21dxrat662221-
21dxrat10422212