Strain & Genotype Data Description


FHH-2BN/Mcwi

Genetic characteristics of the FHH-2BN consomic strains studied.
Presented are the data from a total genome scan performed at a 20 cM interval. Genetic markers used are shown in the first column. The last column displays control DNA from FHH het rats. Other columns display the results for DNA from individual progenitors of the animals used by the Phenotyping Core.
Table Legend:
BN: parental control DNA
FHH: parental control DNA
HET: F1 Heterozygous DNA (from female)
1: Genotyping score given to BN homozygous markers
2: Genotyping score given to FHH homozygous markers
3: Genotyping score given to heterozygous markers
-: Genotype missing

CHR

MARKER NAME

17598_2

17598_4

19287_5

22505_1

22505_2

22505_3

22505_4

22505_6

22505_7

22505_10

22505_11

FHHHET

1d1rat167--2222222223
1d1rat234222222222223
1d1rat265222222222223
1d1rat47222222222223
1d1rat73222222222223
1d1rat89222222222223
2d2rat114111111111113
2d2rat14111111111113
2d2rat20111111111113
2d2mit35111111111113
2d2rat149111111111113
2d2rat65111111111113
3d3mgh8222222222223
3d3rat189222222222223
3d3rat86222222222223
3d3rat217222222222223
3d3rat1222222222223
4d4rat2222222222223
4d4rat14222222222223
4d4rat75222222222223
4d4rat56222222222223
4d4rat11222222222222-
5d5mgh1222222222223
5d5rat84222222222223
5d5rat88222222222223
5d5mit5222222222223
5d5rat33222222222223
5d5rat5022222222222-
6d6rat6722-222222223
6d6rat96222222222223
6d6rat134222222222223
6d6rat98222222222223
6d6mgh9222222222223
6d6rat3222222222223
7d7rat113222222222223
7d7rat83222222222223
7d7rat14222-22222-23
7d7rat94222222222223
8d8rat56222222222223
8d8mit2222222222223
8d8rat30222222222223
8d8rat81222222222223
9d9rat88222222222223
9d9rat3022222222222-
9d9rat9822222222222-
9d9rat4222222222223
9d9rat108222222222223
10d10rat96222222222223
10d10rat73222222222223
10d10rat107222222222223
10d10mgh4222222222223
10d10rat105222222222223
11d11rat32222222222223
11d11rat2322-222222223
11d11rat76222222222223
11d11rat22222222222223
12d12arb13222222222223
12d12rat9222222222223
12d12rat79222222222223
12d12rat49222222222223
13d13mgh1322-222222223
13d13rat88222222222223
13d13rat33222222222223
13d13rat49222222222223
14d14rat24222222222223
14d14rat10222222222223
14d14rat21222222222223
14d14rat94222222222223
15d15mit2222222222223
15d15rat84222222222223
15d15mgh5222222222223
15d15rat29222222222223
16d16rat21222222222223
16d16rat8222222222223
16d16rat72222222222223
16d16rat14222222222223
17d17rat53222222222223
17d17rat11222222222223
17d17rat34222222222223
17d17rat52222222222223
18d18rat17222222222223
18d18rat50222222222223
18d18rat101222222222223
18d18mit12222222222223
19d19rat32222222222223
19d19rat35222222222223
19d19mit2222222222223
19d19rat60222222222223
20d20rat1222222222223
20d20mgh5222222222223
20d20rat10222222222223
20d20mgh1222222222223
21dxrat49222222222223
21dxmgh8222222222223
21dxrat66222222222223
21dxrat104222222222223