Strain & Genotype Data Description


FHH-20BN/Mcwi

Genetic characteristics of the FHH-20BN consomic strains studied.
Presented are the data from a total genome scan performed at a 20 cM interval. Chromosomes are shown in the first column. Genetic markers used are shown in the second column. The last column displays control DNA from het rats. Other columns display the results for DNA from individual progenitors of the animals used by the Phenotyping Core and sent to CRL.
Table Legend:

BN: parental control DNA
FHH: parental control DNA
HET: F1 Heterozygous DNA (from female)
1: Genotyping score given to BN homozygous markers
2: Genotyping score given to FHH homozygous markers
3: Genotyping score given to heterozygous markers
-: Genotype missing

CHR

MARKER NAME

17051_3

17051_4

17051_5

17772_3

17772_4

17772_11

FHH_HET

1d1rat167--22223
1d1rat234---2223
1d1rat2652222223
1d1rat472222223
1d1rat73222222-
1d1rat892222223
2d2rat1142222223
2d2rat142222223
2d2rat202222223
2d2mit352222223
2d2rat1492222223
2d2rat652222223
3d3mgh822-2223
3d3rat1892222223
3d3rat862222223
3d3rat2172222223
3d3rat12222223
4d4rat2---2223
4d4rat14-------
4d4rat752222223
4d4rat562222223
4d4rat72222--23
5d5mgh12222223
5d5rat842222223
5d5mit5222222-
5d5rat332222223
5d5rat502222223
6d6rat672222223
6d6rat962222223
6d6rat982222223
6d6mgh92222223
6d6rat3222--23
7d7rat113--22223
7d7rat832222223
7d7rat14-------
7d7rat942222223
8d8rat562222223
8d8mit2222--23
8d8rat302222223
8d8rat812222223
9d9rat882222223
9d9rat3022-222-
9d9rat9822-222-
9d9rat522222-3
9d9rat108222222-
10d10rat962222223
10d10rat73--22223
10d10rat1072222223
10d10mgh42222223
10d10rat135-------
11d11rat322222223
11d11rat232222223
11d11rat762222223
11d11rat222222223
12d12arb132222223
12d12rat92222223
12d12rat79--22223
12d12rat492222223
13d13mgh132222223
13d13rat88-----23
13d13rat332222223
13d13rat49--22223
14d14rat2422222--
14d14rat10222222-
14d14rat2122222-3
14d14rat942222223
15d15mit2---22--
15d15rat8422222-3
15d15mgh5222--2-
15d15rat2922222--
16d16rat2122222-3
16d16rat82222223
16d16rat722222223
16d16rat142222223
17d17rat532222223
17d17rat112222223
17d17rat34222--23
17d17rat522222223
18d18rat17--22223
18d18rat502222223
18d18rat1012222223
18d18mit122222223
19d19rat322222223
19d19rat2522222-3
19d19mit22222223
19d19rat602222223
20d20rat4611111-3
20d20mgh51111113
20d20rat101111113
20d20mgh11111113
21dxrat492222221
21dxmgh82222221
21dxrat6622-2221
21dxrat104--22221