Strain & Genotype Data Description


FHH-19BN/Mcwi

Genetic characteristics of the FHH-19BN consomic strains studied.
Presented are the data from a total genome scan performed at a 20 cM interval. Chromosomes are shown in the first column. Genetic markers used are shown in the second column. The last column displays control DNA from het rats. Other columns display the results for DNA from individual progenitors of the animals used by the Phenotyping Core and sent to CRL.
Table Legend:

BN: parental control DNA
FHH: parental control DNA
HET: F1 Heterozygous DNA (from female)
1: Genotyping score given to BN homozygous markers
2: Genotyping score given to FHH homozygous markers
3: Genotyping score given to heterozygous markers
-: Genotype missing

CHR

MARKER NAME

14450_10

15379_7

15379_8

15585_11

15585_4

15585_6

17154_5

18115_1

FHH

FHH_HET

1d1rat1672222222223
1d1rat2342222---22-
1d1rat2652222222223
1d1rat47-222222223
1d1rat732222222223
1d1rat89-22---22-3
2d2rat1142222222223
2d2rat14222222-22-
2d2rat202222222223
2d2mit352222222223
2d2rat149-22-22222-
2d2rat652---222-2-
3d3mgh8222-2222--
3d3rat1892222222223
3d3rat86222222222-
3d3rat2172222222223
3d3rat12222222223
4d4rat22222222223
4d4rat142222222223
4d4rat752222222223
4d4rat562222222223
4d4rat722222222223
5d5mgh12222222223
5d5rat842222222223
5d5rat882222222223
5d5mit52222222223
5d5rat332222222223
5d5rat502222222223
6d6rat672222222223
6d6rat962222222223
6d6rat1342--2222-23
6d6rat98-222--222-
6d6mgh92222222223
6d6rat32222222223
7d7rat1132222222-23
7d7rat832222222223
7d7rat142222222223
7d7rat9422222222-3
8d8rat562222222223
8d8mit22222222223
8d8rat302222222223
8d8rat81-22222-223
9d9rat882222222223
9d9rat30222222222-
9d9rat982222222223
9d9rat52222222223
9d9rat1082222222223
10d10rat962222222223
10d10rat73-222222223
10d10rat1072222222223
10d10mgh42222222223
10d10rat1052222222223
11d11rat322222222223
11d11rat232222222223
11d11rat762222222223
11d11rat222222222223
12d12arb132222222223
12d12rat92222-----3
12d12rat792222222223
12d12rat492222222223
13d13mgh1322222222-3
13d13rat882222222223
13d13rat332222222223
13d13rat492222222223
14d14rat242222222223
14d14rat1022222222-3
14d14rat21----------
14d14rat94-222222223
15d15mit22222222223
15d15rat842222222223
15d15mgh52222222223
15d15rat292222222223
16d16rat212222222223
16d16rat82222222223
16d16rat722222222223
16d16rat142--2222223
17d17rat532222222223
17d17rat112222222223
17d17rat342222222223
17d17rat522222222223
18d18rat172222222223
18d18rat502222222223
18d18rat1012222222223
18d18mit22222222223
19d19rat321--1111123
19d19rat251--1111123
19d19mit2-11111112-
19d19rat601111111123
20d20rat462222--2223
20d20mgh52--2222223
20d20rat102222222223
20d20mgh12--2222223
21dxrat492222222221
21dxmgh82222222221
21dxrat6622222222-1
21dxrat1042--222-221