Strain & Genotype Data Description


FHH-17BN/Mcwi

Genetic characteristics of the FHH-17BN consomic strains studied.
Presented are the data from a total genome scan performed at a 20 cM interval. Chromosomes are shown in the first column. Genetic markers used are shown in the second column. The last column displays control DNA from het rats. Other columns display the results for DNA from individual progenitors of the animals phenotyped and sent to CRL for distribution.
Table Legend:
BN: parental control DNA
FHH: parental control DNA
HET: F1 Heterozygous DNA (from female)
1: Genotyping score given to BN homozygous markers
2: Genotyping score given to FHH homozygous markers
3: Genotyping score given to heterozygous markers
-: Genotype missing

CHR

MARKER NAME

11926_1

11926_3

9890_9

9892_5

14769_1

14769_2

14769_3

14769_4

14769_6

14769_8

14769_9

14769_10

14770_1

14770_5

14771_1

14771_2

14771_3

14771_5

14771_6

14771_8

FHH_HET

1d1rat167222222222222222222223
1d1rat234222222222222222222223
1d1rat26522222222222222----223
1d1rat47222222222222222222223
1d1rat8922222222222222--22223
2d2rat114222222222222222222223
2d2rat14222222222222222222223
2d2rat20222222222222222222223
2d2mit35222222222222222222223
2d2rat65222222222222222222223
3d3mgh8222222222222222222223
3d3rat189222222222222222222223
3d3rat86222222222222222222223
3d3rat1222222222222222222223
4d4rat2222222222222222222223
4d4rat14222222222222222222223
4d4rat75222222222222222222223
4d4rat56222222222222222222223
4d4rat72222222222222222222223
5d5mgh1222-22222222--2222223
5d5rat84222222222222222222223
5d5rat88222222222222222222223
5d5mit5222222222222222222223
5d5rat33222222222222222222223
5d5rat50222222222222222222--3
6d6rat67222222222222222222223
6d6rat96222222222222222222223
6d6rat134222222222222222222223
6d6rat98222222222222222222223
6d6mgh9222222222222222222223
6d6rat3222222222222222222223
7d7rat1132222222222222222--22-
7d7rat83222222222222222222223
7d7rat14222222222222222222223
7d7rat94222222222222222222223
8d8rat56222222222222222222223
8d8mit2222222222222222222223
8d8rat30222222222222222222223
8d8rat81222222222222222222223
9d9rat882222--22222222222222-
9d9rat3022222222222222222222-
9d9rat9822-2--22222222222222-
9d9rat522-222--2222--2222223
9d9rat108222222222222222222223
10d10rat9622222222222222222222-
10d10rat73---222222222222222223
10d10rat107---2--222222222222223
10d10mgh4--22--2222--222222---
10d10rat105222222222222222222223
11d11rat32222222222222222222223
11d11rat23222222222222222222223
11d11rat7622222222222222222222-
11d11rat22222-22222222222222223
12d12arb132222222222222222--22-
12d12rat922222222222222222222-
12d12rat49222222222222222222223
13d13mgh13222222222222--222222-
13d13rat88222222222222222222223
13d13rat3322222222222222222222-
13d13rat4922222222222222222222-
14d14rat24222222--222222222222-
14d14rat10222222222222222222223
14d14rat21----22--2222222222223
14d14rat942222--222222222222223
15d15mit2222222222222222222223
15d15rat84222222222222222222223
15d15mgh5222222222222222222223
15d15rat29222222222222222222223
16d16rat21222222222222222222223
16d16rat8222222222222222222223
16d16rat72222222222222222222223
16d16rat14222222222222222222223
17d17rat53111111111111111111113
17d17rat11111111111111111111113
17d17rat34111111--1111111111113
17d17rat52111111111111111111113
18d18rat172222222222--222222223
18d18rat50222222--2222222222223
18d18rat101222222222222222222223
18d18mit12222222--2222222222223
19d19rat32222222--2222222222223
19d19rat25222222--22--222222223
19d19mit222222222222222222222-
19d19rat6022-222222222222222223
20d20rat46222222--2222222222223
20d20mgh5--222222--22222222223
20d20rat1022222222--2222222222-
20d20mgh122222222--22222222223
21dxrat4922222222--22222222221
21dxmgh8222-2222--22222222221
21dxrat6622222222--22222222221
21dxrat104222222222222222222221