Strain & Genotype Data Description


FHH-16BN/Mcwi

Genetic characteristics of the FHH-16BN/Mcwi consomic strains studied.
Presented are the data from a total genome scan performed at a 20 cM interval. Chromosomes are shown in the first column. Genetic markers used are shown in the second column. The last column displays control DNA from het rats. Other columns display the results for DNA from individual progenitors of the animals used by the Phenotyping Core and sent to CRL.
Table Legend:

BN: parental control DNA
FHH: parental control DNA
HET: F1 Heterozygous DNA (from female)
1: Genotyping score given to BN homozygous markers
2: Genotyping score given to FHH homozygous markers
3: Genotyping score given to heterozygous markers
-: Genotype missing

CHR

MARKER NAME

11241_2

14399_6

14399_11

14772_1

14772_3

14772_7

14773_3

FHH_HET

1d1rat16722222223
1d1rat23422222223
1d1rat26522222223
1d1rat4722222223
1d1rat8922222223
2d2rat114-2222223
2d2rat1422222223
2d2rat2022222223
2d2mit352--22223
2d2rat6522222223
3d3mgh8222222-3
3d3rat18922222223
3d3rat8622222223
3d3rat122222223
4d4rat222222223
4d4rat1422222223
4d4rat7522222223
4d4rat5622222223
4d4rat7222222223
5d5mgh122222223
5d5rat8422222223
5d5rat8822222223
5d5mit522222223
5d5rat3322222223
5d5rat50222---23
6d6rat6722222223
6d6rat9622222223
6d6rat13422222223
6d6rat9822222223
6d6mgh922222223
6d6rat322222223
7d7rat1132222222-
7d7rat8322222223
7d7rat1422222223
7d7rat9422222223
8d8rat5622222223
8d8mit222222223
8d8rat3022222223
8d8rat8122222223
9d9rat882222222-
9d9rat302222222-
9d9rat982222222-
9d9rat522222223
9d9rat10822222223
10d10rat962222222-
10d10rat7322222223
10d10rat10722222223
10d10mgh42222222-
10d10rat10522222223
11d11rat3222222223
11d11rat2322222223
11d11rat762222222-
11d11rat2222222223
12d12arb132222222-
12d12rat92222222-
12d12rat4922222223
13d13mgh132222222-
13d13rat8822222223
13d13rat332222222-
13d13rat49222222--
14d14rat242222222-
14d14rat1022222223
14d14rat2122222223
14d14rat9422222223
15d15mit222222223
15d15rat8422222223
15d15mgh522222223
15d15rat2922222223
16d16rat2111111113
16d16rat811111113
16d16rat7211111113
16d16rat1411111113
17d17rat5322222223
17d17rat1122222223
17d17rat3422222223
17d17rat5222222223
18d18rat1722222223
18d18rat5022222223
18d18rat10122222223
18d18mit1222222223
19d19rat3222222223
19d19rat2522222223
19d19mit22222222-
19d19rat6022222223
20d20rat4622222223
20d20mgh522222223
20d20rat102222222-
20d20mgh1222222-3
21dxrat4922222221
21dxmgh822222221
21dxrat6622222221
21dxrat10422222221