Strain & Genotype Data Description


FHH-15BN/Mcwi

Genetic characteristics of the FHH-15BN consomic strains studied.
Presented are the data from a total genome scan performed at a 20 cM interval. Genetic markers used are shown in the first column. The last columns display control DNA from BN and FHH rats. Other columns display the results for DNA from individual progenitors of the animals used by the Phenotyping Core.
Table Legend:
BN: parental control DNA
FHH: parental control DNA
HET: F1 Heterozygous DNA (from female)
1: Genotyping score given to BN homozygous markers
2: Genotyping score given to FHH homozygous markers
3: Genotyping score given to heterozygous markers
-: Genotype missing

CHR

MARKER NAME

21783_1

21783_2

21783_3

14728_6

18877_5

19132_2

19132_5

19132_6

19132_7

BN

FHH

1d1rat16722222222212
1d1rat23422222222212
1d1rat26522222222212
1d1rat4722222222212
1d1rat7322222222212
1d1rat8922222222212
2d2rat11422222222212
2d2rat1422222222212
2d2rat202222222221-
2d2mit3522222222212
2d2rat14922222222212
2d2rat652222222221-
3d3mgh822222222212
3d3rat1892222-222212
3d3rat8622222222212
3d3rat21722222222212
3d3rat122222222212
4d4rat222222222212
4d4rat1422222222212
4d4rat7522222222212
4d4rat56222--------
4d4rat7222222222212
5d5mgh122222222212
5d5rat8422222222212
5d5rat8822222222212
5d5mit522222222212
5d5rat3322222222212
5d5rat5022222222212
6d6rat6722222222212
6d6rat9622222222212
6d6rat13422222222212
6d6rat982222222221-
6d6mgh922222222212
6d6rat322222222212
7d7rat1132222222221-
7d7rat8322222222212
7d7rat1422222222212
7d7rat9422222222212
8d8rat5622222222212
8d8mit222222222212
8d8rat3022222222212
8d8rat81---22222212
9d9rat8822222222212
9d9rat302222222221-
9d9rat9822222222212
9d9rat422222222212
9d9rat10822222222212
10d10rat9622222222212
10d10rat732222222221-
10d10rat10722222222212
10d10mgh422222222212
10d10rat10522222222212
11d11rat3222222222212
11d11rat232222-222-12
11d11rat7622222222212
11d11rat2222222222212
12d12arb1322222222212
12d12rat922222222212
12d12rat792222-222212
12d12rat4922222222212
13d13mgh1322222222212
13d13rat8822222222212
13d13rat3322222222212
13d13rat4922222222212
14d14rat2422222222212
14d14rat102222222221-
14d14rat212222222221-
14d14rat9422222222212
15d15mit211111111112
15d15rat8411111111112
15d15mgh511111111112
15d15rat2911111111112
16d16rat2122222222212
16d16rat822222222212
16d16rat7222222222212
16d16rat1422222222212
17d17rat5322222222212
17d17rat1122222222212
17d17rat3422222222212
17d17rat5222222222212
18d18rat1722222222212
18d18rat5022222222212
18d18rat10122222222212
18d18mit1222222222212
19d19rat3222222222212
19d19rat3522222222212
19d19mit222222222212
19d19rat6022222222212
20d20rat122222222212
20d20mgh522222222212
20d20rat1022222222212
20d20mgh122222222212
21dxrat4922222222212
21dxmgh82222-222212
21dxrat66222--2--2-2
21dxrat10422222222212