Strain & Genotype Data Description


FHH-12BN/Mcwi

Genetic characteristics of the FHH-12BN/Mcwi consomic strains studied.
Presented are the data from a total genome scan performed at a 20 cM interval. Chromosomes are shown in the first column. Genetic markers used are shown in the first column. The last column displays control DNA from het rats. Other columns display the results for DNA from individual progenitors of the animals used by the Phenotyping Core and sent to CRL.
Table Legend:

BN: parental control DNA
FHH: parental control DNA
HET: F1 Heterozygous DNA (from female)
1: Genotyping score given to BN homozygous markers
2: Genotyping score given to FHH homozygous markers
3: Genotyping score given to heterozygous markers
-: Genotype missing

CHR

MARKER NAME

9023_1

9023_10

9023_2

9023_3

9023_4

9023_5

9023_6

9023_7

9023_8

9023_9

9478_1

9478_10

9478_11

9478_12

9478_13

9478_2

9478_3

9478_4

9478_5

9478_6

9478_7

9478_8

9478_9

FHH-HET

1d1rat167222222222222222222222223
1d1rat234222222222222222222222223
1d1rat265222222222222222222222223
1d1rat472222222222--222222222223
1d1rat73222222222222222222222223
1d1rat89222222222222222222222-23
2d2rat114222222-22222222222222223
2d2rat14222222222222222222222223
2d2rat20222222222222222222222223
2d2mit352222222222222222222222-3
2d2rat149222222222222222222222223
2d2rat65222222222222222222222223
3d3mgh8222222222222222222222223
3d3rat1892222222222222222222222-3
3d3rat862222222222222222222222--
3d3rat21722222222222--22222222223
3d3rat1222222222222-222222222-3
4d4rat2222222-22222222222222223
4d4rat14222222222222222222222223
4d4rat75222222222222222222222223
4d4rat56222222222222222222222223
4d4rat72222-2-222222222222222223
5d5mgh1222222222222222222222223
5d5rat84222222222222222222222223
5d5rat88222222222222222222222223
5d5mit5222---2222-2222222222223
5d5rat33222222222222222222222223
5d5rat50222-22222222222222222223
6d6rat67222222222222222222222223
6d6rat96222222222222222222222223
6d6rat134222222222222222222222223
6d6rat98-22222222222222222222223
6d6mgh9222222222222222222222223
6d6rat3222222222222222222222223
7d7rat113222222222222222222222223
7d7rat83222222222222222222222223
7d7rat1422222222222222-222222223
7d7rat94222222222222222222222223
8d8rat56222222222222222222222223
8d8mit2222222222222222222222223
8d8rat30222222222222222222222223
8d8rat81222222222222222222222223
9d9rat88222222222222222222222223
9d9rat30222222222222222222222223
9d9rat98222222222222222222222223
9d9rat5222222222222222222222223
9d9rat108222222222222222222222223
10d10rat96222222222222222222222223
10d10rat73222222222222222222222223
10d10rat107222222222222222222222223
10d10mgh42222-2222222222222-22223
10d10rat135222--2222222222222222223
11d11rat32222222222222222222222223
11d11rat23222222222222-222-2222223
11d11rat76222222222222222222222223
11d11rat22222-22222222222222222223
12d12arb1311111111111111111111-113
12d12rat9111111111111111111111113
12d12rat79111111111111111111111113
12d12rat49111111111111111111111113
13d13mgh13222222222222222222-22223
13d13rat88222222222222222222222223
13d13rat33-2---22222-2222222222223
13d13rat49222222222222222222222223
14d14rat48222222222222222222222223
14d14mit322222-22-22222222-2-2223
14d14rat21222222222222222222222223
14d14rat94222222222222222222222223
15d15mit2222222222222222222222223
15d15rat84222222222222222222222223
15d15mgh5222222222222222222222223
15d15rat2922222222-2222222222-222-
16d16rat21222222222222222222222223
16d16rat8222222222222222222222223
16d16rat7222222222-222222222222223
16d16rat14222222222222222222222223
17d17rat53222222222222222222222223
17d17rat11222222222222222222222223
17d17rat34222222222222222222222223
17d17rat52222222222222222222222223
18d18rat17222222222222222222222223
18d18rat50222222222222222222222223
18d18rat101222222222222222222222223
18d18mit12222222222222222222222223
19d19rat32222222222222222222222223
19d19rat25222222222222222222222223
19d19mit222222-222222222222222223
19d19rat602222222222222222222-2223
20d20rat46222222-22222222222222223
20d20mgh5222222222222222222222223
20d20rat1022222222-2222222222-2223
20d20mgh1222222222222222222222223
21dxrat4922222222-222222222222221
21dxmgh8222222222222222222222221
21dxrat6622222222-22-22-2222-2221
21dxrat104222222222222222222-22221