Strain & Genotype Data Description


FHH-11BN/Mcwi

Genetic characteristics of the FHH-11BN consomic strains studied.
Presented are the data from a total genome scan performed at a 20 cM interval. Genetic markers used are shown in the first column. The last columns displays control DNA from BN and FHH rats. Other columns display the results for DNA from individual progenitors of the animals used by the Phenotyping Core.
Table Legend:
BN: parental control DNA
FHH: parental control DNA
HET: F1 Heterozygous DNA (from female)
1: Genotyping score given to BN homozygous markers
2: Genotyping score given to FHH homozygous markers
3: Genotyping score given to heterozygous markers
-: Genotype missing

CHR

MARKER NAME

20224_3

17778_6

20399_8

18846_1

18846_5

18846_6

19595_5

19584_4

19746_1

BN

FHH

1d1rat16722-22222212
1d1rat23422222222212
1d1rat26522222222212
1d1rat4722222222212
1d1rat7322222222212
1d1rat8922222222212
2d2rat11422222222212
2d2rat1422222222212
2d2rat2022222222212
2d2mit3522222222212
2d2rat14922222222212
2d2rat65-2222222212
3d3mgh822222222212
3d3rat18922222222212
3d3rat8622222222212
3d3rat21722222222212
3d3rat122222222212
4d4rat222222222212
4d4rat1422222222212
4d4rat7522222222212
4d4rat562-2222-2-1-
4d4rat7222222222212
5d5mgh1222222-2212
5d5rat8422222222212
5d5rat8822222222212
5d5mit522222222212
5d5rat3322222222212
5d5rat5022222222212
6d6rat6722222222212
6d6rat9622222222212
6d6rat13422222222212
6d6rat9822222222212
6d6mgh922222222212
6d6rat322222222212
7d7rat11322222222212
7d7rat8322222222212
7d7rat1422222222212
7d7rat9422222222212
8d8rat5622222222212
8d8mit222222222212
8d8rat3022222222212
8d8rat8122222222212
9d9rat8822222222212
9d9rat3022222222212
9d9rat9822222222212
9d9rat522222222212
9d9rat10822222222212
10d10rat9622222222212
10d10rat7322222222212
10d10rat10722222222212
10d10mgh422-22222212
10d10rat10522-22222212
11d11rat3211111111112
11d11rat2311111111112
11d11rat7611111111112
11d11rat2211111111112
12d12arb1322222222212
12d12rat922222222212
12d12rat7922222222212
12d12rat4922222222212
13d13mgh1322222222212
13d13rat8822222222212
13d13rat3322222222212
13d13rat4922222222212
14d14rat2422222222212
14d14rat2122222222212
14d14rat9422222222212
14d14rat1022222222212
15d15mit222222222212
15d15rat8422222222212
15d15mgh522222222212
15d15rat292222222221-
16d16rat2122222222212
16d16rat822-22222212
16d16rat7222222222212
16d16rat1422222222212
17d17rat5322222222212
17d17rat1122222222212
17d17rat3422222222212
17d17rat5222222222212
18d18rat1722222222212
18d18rat5022222222212
18d18rat10122222222212
18d18mit1222222222212
19d19rat3222222222212
19d19rat2522222222212
19d19mit22-222222-12
19d19rat6022222222212
20d20rat122222222212
20d20mgh522222222212
20d20rat1022222222212
20d20mgh122222222212
21dxrat4922222222212
21dxmgh822222222212
21dxrat6622222222212
21dxrat10422222222212