Strain & Genotype Data Description


BN

Genetic characteristics of the BN parental strain.
Presented are the data from a total genome scan performed at a 20 cM interval. Chromosomes are shown in the first column. Genetic markers used are shown in the second column. The last column displays control DNA from het rats. Other columns display the results for DNA from individual progenitors of the animals used by the Phenotyping Core. Animals 10067 and 10068 represent the family that is founding the CRL colony.
Table Legend:
BN: parental control DNA
SS: parental control DNA
HET: F1 Heterozygous DNA (from female)
1: Genotyping score given to BN homozygous markers
2: Genotyping score given to SS homozygous markers
3: Genotyping score given to heterozygous markers
-: Genotype missing

CHR

MARKER NAME

9373

9401

9402

9581

9582

9613

9629

9630

9694

9695

9698

9699

9713

9714

9774

9830

9831

10067

10068

HET

1d1rat16711111111111111111113
1d1rat2341-111111111111111113
1d1rat26511111111111111111113
1d1rat4711111111111111111113
1d1rat7311111111111111111113
1d1rat8911111111111111111113
2d2rat11411111111111111111113
2d2rat1411111111111111111113
2d2mit3511111111111111111113
2d2rat14911111111111111111113
2d2rat6511111111111111111113
3d3mgh811111111111111111113
3d3rat18911111111111111111113
3d3rat8611111111111111111113
3d3rat21711111111111111111113
3d3rat111111111111111111113
4d4rat211111111111111111113
4d4rat1411111111111111111113
4d4rat751111111111111111111-
4d4rat561-111111111111111113
4d4rat20211111111111111111113
5d5mgh111111111111111111113
5d5rat8411111111111111111113
5d5rat1611111111111111111113
5d5rat8811111111111111111113
5d5mit511111111111111111113
5d5rat3311111111111111111113
5d5rat5011111111111111111113
6d6rat6711111111111111111113
6d6rat9611111111111111111113
6d6rat9811111111111111111113
6d6mgh911111111111111111113
6d6rat7511111111111111111113
7d7rat11311111111111111111113
7d7rat8311111111111111111113
7d7rat1411111111111111111113
7d7rat9411111111111111111113
8d8rat5611111111111111111113
8d8mit211111111111111111113
8d8rat3011111111111111111113
8d8rat8111111111111111111113
9d9rat8811111111111111111113
9d9rat3011111111111111111113
9d9rat9811111111111111111113
9d9rat511111111111111111113
9d9rat10811111111111111111113
10d10rat9611111111111111111113
10d10rat7311111111111111111113
10d10rat10711111111111111111113
10d10mgh411111111111111111113
10d10rat1351-111111-11111-11113
11d11rat3211111111111111111113
11d11mit411111111111111111113
11d11rat7611111111111111111113
11d11rat2211111111111111111113
12d12arb13-1111111111111111113
12d12rat911111111111111111113
12d12rat7911111111111111111113
12d12rat4911111111111111111113
13d13mgh1311111111111111111113
13d13rat8811111111111111111113
13d13rat3311111111111111111113
13d13rat19211111111111111111113
14d14rat4811111111111111111113
14d14mit311111-1111111111111-
14d14rat2111111111111111111113
14d14rat9411111111111111111113
15d15mit211111111111111111113
15d15rat1311111111111111111113
15d15mgh511111111111111111113
15d15rat2911111111111111111113
16d16rat2111111111111111111113
16d16rat811111111111111111113
16d16rat7211111111111111111113
16d16rat1411111111111111111113
17d17rat53111111111111111--113
17d17rat1111111111111111111113
17d17rat3611111111111111111113
17d17rat5211111111111111111113
18d18rat1711111111111111111113
18d18rat50111111--111111111--3
18d18rat10111111111111111111113
18d18mit1311111111111111111113
19d19rat3211111111111111111113
19d19rat2511111111111111111113
19d19mit211111111111111111113
19d19rat6011111111111111111113
20d20rat4611111111111111111113
20d20mgh511111111111111111113
20d20rat1011111111111111111113
20d20mgh111111111111111111113
21dxrat4911111111111111111111
21dxmgh811111111111111111111
21dxrat66111-1131111111111111
21dxrat10411111111111111111111